BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B01SP1|AL428840
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1722 1746 0.0
>3x_Contig1722
Length = 17718
Score = 1746 bits (881), Expect = 0.0
Identities = 881/881 (100%)
Strand = Plus / Minus
Query: 1 tgtaccgttacgctgtaatatttcatgagatcttgaatgatccagagaatttccagaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5076 tgtaccgttacgctgtaatatttcatgagatcttgaatgatccagagaatttccagaaag 5017
Query: 61 cggtggttttttattcgtctacatcgacgagacaacgcgcaaacgctgcttgtatgctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5016 cggtggttttttattcgtctacatcgacgagacaacgcgcaaacgctgcttgtatgctgt 4957
Query: 121 gttgctacatggtattgatccagggttggactcctcatcaagttttgcagccgttggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4956 gttgctacatggtattgatccagggttggactcctcatcaagttttgcagccgttggctc 4897
Query: 181 aagtagatcctccgtttatgccatttagagatgcaggttattcgaacgccgattttgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4896 aagtagatcctccgtttatgccatttagagatgcaggttattcgaacgccgattttgaaa 4837
Query: 241 ttacaattcaagatatagtatatggtatctggagagcaaaagagaatggattgattgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4836 ttacaattcaagatatagtatatggtatctggagagcaaaagagaatggattgattgatc 4777
Query: 301 tttcgaatttccaattagaaacttatgaaaaatatgaaagagtagagaatggtgatttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4776 tttcgaatttccaattagaaacttatgaaaaatatgaaagagtagagaatggtgatttaa 4717
Query: 361 acgcattgactccagatttcattgcttttgcttcgccacaagaggagatgcgccgacacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4716 acgcattgactccagatttcattgcttttgcttcgccacaagaggagatgcgccgacacc 4657
Query: 421 aagcattatcttctgcgactaagtcccacttgaatcaacccttccgtaaagtgttggatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4656 aagcattatcttctgcgactaagtcccacttgaatcaacccttccgtaaagtgttggatt 4597
Query: 481 attttaaagagaacgatgttcaattggtcgttagattaaactcccatctttacaacaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4596 attttaaagagaacgatgttcaattggtcgttagattaaactcccatctttacaacaaga 4537
Query: 541 aacatttcgaagatatcggcatacagcatctggatatgatttttgaagatggaacttgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4536 aacatttcgaagatatcggcatacagcatctggatatgatttttgaagatggaacttgtc 4477
Query: 601 ccgatttatcaattgtgcaaaatttcgtaggggcagcagaaaccataataaagcaaggcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4476 ccgatttatcaattgtgcaaaatttcgtaggggcagcagaaaccataataaagcaaggcg 4417
Query: 661 gtaaaatcgcagtccattgtaaggccgggttaggaagaacaggatgtttaatcggtgcgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4416 gtaaaatcgcagtccattgtaaggccgggttaggaagaacaggatgtttaatcggtgcgc 4357
Query: 721 atttgatatacacttacggattcactgcaaatgaatgcattgggttcttgagatttatga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4356 atttgatatacacttacggattcactgcaaatgaatgcattgggttcttgagatttatga 4297
Query: 781 gacctggtatggttgttggacctcaacagcattggttgtatctaaatcaaaattctttta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 gacctggtatggttgttggacctcaacagcattggttgtatctaaatcaaaattctttta 4237
Query: 841 gagaatggaaatataccatgcggttatcacaggaaccaagc 881
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 4236 gagaatggaaatataccatgcggttatcacaggaaccaagc 4196
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6691
Number of Sequences: 1807
Number of extensions: 6691
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)